#!/usr/bin/env python
# coding: utf-8

# <!--NOTEBOOK_HEADER-->
# *This notebook contains material from [PyRosetta](https://RosettaCommons.github.io/PyRosetta.notebooks);
# content is available [on Github](https://github.com/RosettaCommons/PyRosetta.notebooks.git).*

# <!--NAVIGATION-->
# < [Jupyter Notebooks, Python, and Google Colaboratory](http://nbviewer.jupyter.org/github/RosettaCommons/PyRosetta.notebooks/blob/master/notebooks/01.02-Notebooks-Python-Colab.ipynb) | [Contents](toc.ipynb) | [Index](index.ipynb) | [Introduction to PyRosetta](http://nbviewer.jupyter.org/github/RosettaCommons/PyRosetta.notebooks/blob/master/notebooks/02.00-Introduction-to-PyRosetta.ipynb) ><p><a href="https://colab.research.google.com/github/RosettaCommons/PyRosetta.notebooks/blob/master/notebooks/01.03-FAQ.ipynb"><img align="left" src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Colab" title="Open in Google Colaboratory"></a>

# # Frequently Asked Questions/Troubleshooting Tips

# **Q1: I went through the setup instructions, but importing PyRosetta causes an error.**

# Few things you could try:
# - Make sure that you ran every cell in the `PyRosetta Google Drive Setup` notebook (Chapter 1.01) before importing PyRosetta.
# 
# - Make sure that you installed the correct version of PyRosetta. It has to be the Linux version or it won't work. If you did happen to use an incorrect version, just delete the wrong PyRosetta package from your Google Drive, upload the correct one, delete the `prefix` folder, and try running Chapter 1.01 again.
# 
# - Make sure that the directory tree is correct. The `PyRosetta` folder should be in the _top directory_ in your Google Drive, as well as the `notebooks` or `student-notebooks` folder. Your notebooks, including Chapter 01.01 should reside in either `notebooks` or `student-notebooks`.

# **Q2: The `make-student-nb.bash` script doesn't work.**
# 
# This script automatically synchronizes the `notebooks` and `student-notebooks` folders. All changes should be made in `notebooks`. The script relies on the `nbgrader` module and the `nbpages` module. Make sure you've installed these before running the script (you might even have to update these modules).
# 
# If you just want to update the Table of Contents or Keywords files, you can just use the `nbpages` command alone.
# 
# If nbgrader is the problem, you might have to run the command: `nbgrader update .`

# In[ ]:





# <!--NAVIGATION-->
# < [Jupyter Notebooks, Python, and Google Colaboratory](http://nbviewer.jupyter.org/github/RosettaCommons/PyRosetta.notebooks/blob/master/notebooks/01.02-Notebooks-Python-Colab.ipynb) | [Contents](toc.ipynb) | [Index](index.ipynb) | [Introduction to PyRosetta](http://nbviewer.jupyter.org/github/RosettaCommons/PyRosetta.notebooks/blob/master/notebooks/02.00-Introduction-to-PyRosetta.ipynb) ><p><a href="https://colab.research.google.com/github/RosettaCommons/PyRosetta.notebooks/blob/master/notebooks/01.03-FAQ.ipynb"><img align="left" src="https://colab.research.google.com/assets/colab-badge.svg" alt="Open in Colab" title="Open in Google Colaboratory"></a>