#!/usr/bin/env python
# coding: utf-8

# ## Birdsong brain data imaging package (birdbrain)
# - by Tim Sainburg & Marvin Thielk

# ### Instructions
# - Everything here runs on Jupyter notebooks. You can view them online and interactively using [Binder](https://mybinder.org/v2/gh/timsainb/birdbrain/master?filepath=Index.ipynb), or locally using `pip install birdbrain`, and downloading the [GitHub repository](https://github.com/timsainb/birdbrain)
# - This is the index page, where by running the cells below, you will find all of the example notebooks for plotting brain data. 
# - Most of the examples were produced for the European starling dataset but should work for the canary, bat, pigeon, and finch datasets as well. I reccomend taking a look through the starling dataset to see if there's anything you want to try in the other species. 
# - If anything is not working properly - raise an issue on the [GitHub page](https://github.com/timsainb/birdbrain). 

# In[27]:


from IPython.display import Markdown
from glob import glob

Markdown(
    "\n".join(
        [
            '\n'.join(['### ' + species] + [
                "-  <a href='{1}' target='_blank'>{0}</a>".format(
                    x[9:-6].replace("_", " "), x)
                for x in sorted(glob("notebooks/"+loc+"/*.ipynb"))
            ]) for species, loc in [['European starling', 'starling'], 
                                    ['Canary', 'canary'],
                                   ['Mustached bat', 'mustached_bat'],
                                   ['Pigeon', 'pigeon'],
                                   ['Zebra finch', 'zebra_finch']]
        ]
    )
)


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