Explore HadGEM3 CMIP6 data¶

/home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/geoviews/operation/__init__.py:14: HoloviewsDeprecationWarning: 'ResamplingOperation' is deprecated and will be removed in version 1.17, use 'ResampleOperation2D' instead.
  from holoviews.operation.datashader import (

---------------------------------------------------------------------------
ValueError                                Traceback (most recent call last)
File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/IPython/core/formatters.py:974, in MimeBundleFormatter.__call__(self, obj, include, exclude)
    971     method = get_real_method(obj, self.print_method)
    973     if method is not None:
--> 974         return method(include=include, exclude=exclude)
    975     return None
    976 else:

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/core/dimension.py:1290, in Dimensioned._repr_mimebundle_(self, include, exclude)
   1283 def _repr_mimebundle_(self, include=None, exclude=None):
   1284     """
   1285     Resolves the class hierarchy for the class rendering the
   1286     object using any display hooks registered on Store.display
   1287     hooks.  The output of all registered display_hooks is then
   1288     combined and returned.
   1289     """
-> 1290     return Store.render(self)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/core/options.py:1425, in Store.render(cls, obj)
   1423 data, metadata = {}, {}
   1424 for hook in hooks:
-> 1425     ret = hook(obj)
   1426     if ret is None:
   1427         continue

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/ipython/display_hooks.py:280, in pprint_display(obj)
    278 if not ip.display_formatter.formatters['text/plain'].pprint:
    279     return None
--> 280 return display(obj, raw_output=True)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/ipython/display_hooks.py:254, in display(obj, raw_output, **kwargs)
    252 elif isinstance(obj, (HoloMap, DynamicMap)):
    253     with option_state(obj):
--> 254         output = map_display(obj)
    255 elif isinstance(obj, Plot):
    256     output = render(obj)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/ipython/display_hooks.py:142, in display_hook.<locals>.wrapped(element)
    140 try:
    141     max_frames = OutputSettings.options['max_frames']
--> 142     mimebundle = fn(element, max_frames=max_frames)
    143     if mimebundle is None:
    144         return {}, {}

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/ipython/display_hooks.py:202, in map_display(vmap, max_frames)
    199     max_frame_warning(max_frames)
    200     return None
--> 202 return render(vmap)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/ipython/display_hooks.py:69, in render(obj, **kwargs)
     66 if renderer.fig == 'pdf':
     67     renderer = renderer.instance(fig='png')
---> 69 return renderer.components(obj, **kwargs)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/plotting/renderer.py:399, in Renderer.components(self, obj, fmt, comm, **kwargs)
    396 embed = (not (dynamic or streams or self.widget_mode == 'live') or config.embed)
    398 if embed or config.comms == 'default':
--> 399     return self._render_panel(plot, embed, comm)
    400 return self._render_ipywidget(plot)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/plotting/renderer.py:406, in Renderer._render_panel(self, plot, embed, comm)
    404 doc = Document()
    405 with config.set(embed=embed):
--> 406     model = plot.layout._render_model(doc, comm)
    407 if embed:
    408     return render_model(model, comm)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/panel/viewable.py:509, in Renderable._render_model(self, doc, comm)
    507 if comm is None:
    508     comm = state._comm_manager.get_server_comm()
--> 509 model = self.get_root(doc, comm)
    511 if config.embed:
    512     embed_state(self, model, doc,
    513                 json=config.embed_json,
    514                 json_prefix=config.embed_json_prefix,
    515                 save_path=config.embed_save_path,
    516                 load_path=config.embed_load_path,
    517                 progress=False)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/panel/viewable.py:560, in Renderable.get_root(self, doc, comm, preprocess)
    543 """
    544 Returns the root model and applies pre-processing hooks
    545 
   (...)
    557 Returns the bokeh model corresponding to this panel object
    558 """
    559 doc = init_doc(doc)
--> 560 root = self._get_model(doc, comm=comm)
    561 if preprocess:
    562     self._preprocess(root)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/panel/layout/base.py:146, in Panel._get_model(self, doc, root, parent, comm)
    144 if root is None:
    145     root = model
--> 146 objects = self._get_objects(model, [], doc, root, comm)
    147 props = dict(self._init_params(), objects=objects)
    148 model.update(**self._process_param_change(props))

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/panel/layout/base.py:131, in Panel._get_objects(self, model, old_objects, doc, root, comm)
    129 else:
    130     try:
--> 131         child = pane._get_model(doc, root, model, comm)
    132     except RerenderError:
    133         return self._get_objects(model, current_objects[:i], doc, root, comm)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/panel/pane/holoviews.py:367, in HoloViews._get_model(self, doc, root, parent, comm)
    365     plot = self.object
    366 else:
--> 367     plot = self._render(doc, comm, root)
    369 plot.pane = self
    370 backend = plot.renderer.backend

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/panel/pane/holoviews.py:442, in HoloViews._render(self, doc, comm, root)
    439     if comm:
    440         kwargs['comm'] = comm
--> 442 return renderer.get_plot(self.object, **kwargs)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/plotting/bokeh/renderer.py:70, in BokehRenderer.get_plot(self_or_cls, obj, doc, renderer, **kwargs)
     63 @bothmethod
     64 def get_plot(self_or_cls, obj, doc=None, renderer=None, **kwargs):
     65     """
     66     Given a HoloViews Viewable return a corresponding plot instance.
     67     Allows supplying a document attach the plot to, useful when
     68     combining the bokeh model with another plot.
     69     """
---> 70     plot = super().get_plot(obj, doc, renderer, **kwargs)
     71     if plot.document is None:
     72         plot.document = Document() if self_or_cls.notebook_context else curdoc()

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/plotting/renderer.py:241, in Renderer.get_plot(self_or_cls, obj, doc, renderer, comm, **kwargs)
    238     defaults = [kd.default for kd in plot.dimensions]
    239     init_key = tuple(v if d is None else d for v, d in
    240                      zip(plot.keys[0], defaults))
--> 241     plot.update(init_key)
    242 else:
    243     plot = obj

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/plotting/plot.py:936, in DimensionedPlot.update(self, key)
    934 def update(self, key):
    935     if len(self) == 1 and ((key == 0) or (key == self.keys[0])) and not self.drawn:
--> 936         return self.initialize_plot()
    937     item = self.__getitem__(key)
    938     self.traverse(lambda x: setattr(x, '_updated', True))

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/plotting/bokeh/element.py:1527, in ElementPlot.initialize_plot(self, ranges, plot, plots, source)
   1525 if self.autorange:
   1526     self._setup_autorange()
-> 1527 self._init_glyphs(plot, element, ranges, source)
   1528 if not self.overlaid:
   1529     self._update_plot(key, plot, style_element)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/plotting/bokeh/element.py:1469, in ElementPlot._init_glyphs(self, plot, element, ranges, source)
   1467 else:
   1468     style = self.style[self.cyclic_index]
-> 1469     data, mapping, style = self.get_data(element, ranges, style)
   1470     current_id = element._plot_id
   1472 with abbreviated_exception():

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/plotting/bokeh/raster.py:271, in QuadMeshPlot.get_data(self, element, ranges, style)
    267     return {}, mapping, style
    269 x, y = dimension_sanitizer(x.name), dimension_sanitizer(y.name)
--> 271 zdata = element.dimension_values(z, flat=False)
    272 hover_data = {}
    274 if irregular:

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/core/data/__init__.py:199, in PipelineMeta.pipelined.<locals>.pipelined_fn(*args, **kwargs)
    196     inst._in_method = True
    198 try:
--> 199     result = method_fn(*args, **kwargs)
    200     if PipelineMeta.disable:
    201         return result

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/core/data/__init__.py:1093, in Dataset.dimension_values(self, dimension, expanded, flat)
   1077 """Return the values along the requested dimension.
   1078 
   1079 Args:
   (...)
   1090     NumPy array of values along the requested dimension
   1091 """
   1092 dim = self.get_dimension(dimension, strict=True)
-> 1093 values = self.interface.values(self, dim, expanded, flat)
   1094 if dim.nodata is not None:
   1095     # Ensure nodata applies to boolean data in py2
   1096     values = np.where(values==dim.nodata, np.NaN, values)

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/core/data/xarray.py:421, in XArrayInterface.values(cls, dataset, dim, expanded, flat, compute, keep_index)
    419         data = cupy.asnumpy(data)
    420     if not keep_index:
--> 421         data = cls.canonicalize(dataset, data, data_coords=data_coords,
    422                                 virtual_coords=virtual_coords)
    423     return data.T.flatten() if flat and not keep_index else data
    424 elif expanded:

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/core/data/grid.py:332, in GridInterface.canonicalize(cls, dataset, data, data_coords, virtual_coords)
    329         data = np.squeeze(data, axis=tuple(dropped))
    331 if not any(cls.irregular(dataset, d) for d in dataset.kdims):
--> 332     inds = [dims.index(kd.name) for kd in dataset.kdims]
    333     inds = [i - sum([1 for d in dropped if i>=d]) for i in inds]
    334     if inds:

File /home/conda/users/222098f819851fd4ec9d4c9445d950452119627537a69aa8cd965d7dbb1ef7e2-20230602-144731-342097-199-pangeo/lib/python3.10/site-packages/holoviews/core/data/grid.py:332, in <listcomp>(.0)
    329         data = np.squeeze(data, axis=tuple(dropped))
    331 if not any(cls.irregular(dataset, d) for d in dataset.kdims):
--> 332     inds = [dims.index(kd.name) for kd in dataset.kdims]
    333     inds = [i - sum([1 for d in dropped if i>=d]) for i in inds]
    334     if inds:

ValueError: 'longitude' is not in list