Collecting git+https://github.com/GMOD/jbrowse-jupyter.git@main
Cloning https://github.com/GMOD/jbrowse-jupyter.git (to revision main) to /private/var/folders/96/hq94_1qd3c9_q87bwqhg05s80000gn/T/pip-req-build-emfgm9s3
Running command git clone --filter=blob:none -q https://github.com/GMOD/jbrowse-jupyter.git /private/var/folders/96/hq94_1qd3c9_q87bwqhg05s80000gn/T/pip-req-build-emfgm9s3
Resolved https://github.com/GMOD/jbrowse-jupyter.git to commit 5a7a753cf3ada2d028992c67ed305e0ea575555b
Preparing metadata (setup.py) ... done
Collecting dash==2.0.0
Using cached dash-2.0.0-py3-none-any.whl (7.3 MB)
Collecting dash-jbrowse>=1.0.1
Using cached dash_jbrowse-1.0.1-py3-none-any.whl (1.1 MB)
Requirement already satisfied: flake8>=4.0.1 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jbrowse-jupyter==1.2.1) (4.0.1)
Requirement already satisfied: jupyter_dash>=0.4.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jbrowse-jupyter==1.2.1) (0.4.0)
Requirement already satisfied: pandas>=1.1.5 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jbrowse-jupyter==1.2.1) (1.4.0)
Requirement already satisfied: pytest>=6.2.5 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jbrowse-jupyter==1.2.1) (6.2.5)
Requirement already satisfied: dash-table==5.0.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from dash==2.0.0->jbrowse-jupyter==1.2.1) (5.0.0)
Requirement already satisfied: flask-compress in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from dash==2.0.0->jbrowse-jupyter==1.2.1) (1.10.1)
Requirement already satisfied: dash-core-components==2.0.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from dash==2.0.0->jbrowse-jupyter==1.2.1) (2.0.0)
Requirement already satisfied: plotly>=5.0.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from dash==2.0.0->jbrowse-jupyter==1.2.1) (5.3.1)
Requirement already satisfied: dash-html-components==2.0.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from dash==2.0.0->jbrowse-jupyter==1.2.1) (2.0.0)
Requirement already satisfied: Flask>=1.0.4 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from dash==2.0.0->jbrowse-jupyter==1.2.1) (1.1.2)
Requirement already satisfied: pycodestyle<2.9.0,>=2.8.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from flake8>=4.0.1->jbrowse-jupyter==1.2.1) (2.8.0)
Requirement already satisfied: mccabe<0.7.0,>=0.6.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from flake8>=4.0.1->jbrowse-jupyter==1.2.1) (0.6.1)
Requirement already satisfied: pyflakes<2.5.0,>=2.4.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from flake8>=4.0.1->jbrowse-jupyter==1.2.1) (2.4.0)
Requirement already satisfied: ipykernel in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (5.3.4)
Requirement already satisfied: ansi2html in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (1.6.0)
Requirement already satisfied: retrying in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (1.3.3)
Requirement already satisfied: requests in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (2.24.0)
Requirement already satisfied: ipython in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (7.19.0)
Requirement already satisfied: python-dateutil>=2.8.1 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pandas>=1.1.5->jbrowse-jupyter==1.2.1) (2.8.1)
Requirement already satisfied: numpy>=1.18.5 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pandas>=1.1.5->jbrowse-jupyter==1.2.1) (1.19.2)
Requirement already satisfied: pytz>=2020.1 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pandas>=1.1.5->jbrowse-jupyter==1.2.1) (2020.1)
Requirement already satisfied: packaging in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pytest>=6.2.5->jbrowse-jupyter==1.2.1) (20.4)
Requirement already satisfied: iniconfig in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pytest>=6.2.5->jbrowse-jupyter==1.2.1) (1.1.1)
Requirement already satisfied: attrs>=19.2.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pytest>=6.2.5->jbrowse-jupyter==1.2.1) (20.3.0)
Requirement already satisfied: py>=1.8.2 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pytest>=6.2.5->jbrowse-jupyter==1.2.1) (1.9.0)
Requirement already satisfied: toml in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pytest>=6.2.5->jbrowse-jupyter==1.2.1) (0.10.1)
Requirement already satisfied: pluggy<2.0,>=0.12 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pytest>=6.2.5->jbrowse-jupyter==1.2.1) (0.13.1)
Requirement already satisfied: click>=5.1 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from Flask>=1.0.4->dash==2.0.0->jbrowse-jupyter==1.2.1) (7.1.2)
Requirement already satisfied: itsdangerous>=0.24 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from Flask>=1.0.4->dash==2.0.0->jbrowse-jupyter==1.2.1) (1.1.0)
Requirement already satisfied: Jinja2>=2.10.1 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from Flask>=1.0.4->dash==2.0.0->jbrowse-jupyter==1.2.1) (2.11.2)
Requirement already satisfied: Werkzeug>=0.15 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from Flask>=1.0.4->dash==2.0.0->jbrowse-jupyter==1.2.1) (2.0.2)
Requirement already satisfied: tenacity>=6.2.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from plotly>=5.0.0->dash==2.0.0->jbrowse-jupyter==1.2.1) (8.0.1)
Requirement already satisfied: six in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from plotly>=5.0.0->dash==2.0.0->jbrowse-jupyter==1.2.1) (1.16.0)
Requirement already satisfied: brotli in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from flask-compress->dash==2.0.0->jbrowse-jupyter==1.2.1) (1.0.9)
Requirement already satisfied: appnope in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipykernel->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (0.1.0)
Requirement already satisfied: tornado>=4.2 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipykernel->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (6.0.4)
Requirement already satisfied: jupyter-client in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipykernel->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (6.1.7)
Requirement already satisfied: traitlets>=4.1.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipykernel->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (5.1.1)
Requirement already satisfied: pygments in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (2.7.2)
Requirement already satisfied: decorator in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (4.4.2)
Requirement already satisfied: setuptools>=18.5 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (59.2.0)
Requirement already satisfied: backcall in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (0.2.0)
Requirement already satisfied: prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (3.0.8)
Requirement already satisfied: jedi>=0.10 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (0.17.1)
Requirement already satisfied: pexpect>4.3 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (4.8.0)
Requirement already satisfied: pickleshare in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (0.7.5)
Requirement already satisfied: pyparsing>=2.0.2 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from packaging->pytest>=6.2.5->jbrowse-jupyter==1.2.1) (2.4.7)
Requirement already satisfied: urllib3!=1.25.0,!=1.25.1,<1.26,>=1.21.1 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from requests->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (1.25.11)
Requirement already satisfied: idna<3,>=2.5 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from requests->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (2.10)
Requirement already satisfied: certifi>=2017.4.17 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from requests->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (2020.6.20)
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Requirement already satisfied: MarkupSafe>=0.23 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from Jinja2>=2.10.1->Flask>=1.0.4->dash==2.0.0->jbrowse-jupyter==1.2.1) (2.0.1)
Requirement already satisfied: ptyprocess>=0.5 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from pexpect>4.3->ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (0.6.0)
Requirement already satisfied: wcwidth in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from prompt-toolkit!=3.0.0,!=3.0.1,<3.1.0,>=2.0.0->ipython->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (0.2.5)
Requirement already satisfied: pyzmq>=13 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jupyter-client->ipykernel->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (19.0.2)
Requirement already satisfied: jupyter-core>=4.6.0 in /Users/teresamartinez/opt/anaconda3/lib/python3.8/site-packages (from jupyter-client->ipykernel->jupyter_dash>=0.4.0->jbrowse-jupyter==1.2.1) (4.6.3)
Building wheels for collected packages: jbrowse-jupyter
Building wheel for jbrowse-jupyter (setup.py) ... done
Created wheel for jbrowse-jupyter: filename=jbrowse_jupyter-1.2.1-py3-none-any.whl size=23012 sha256=dc06962e969611682d804c0be04df525f0ddaf4de081e7ff81ca334a6ad8ef75
Stored in directory: /private/var/folders/96/hq94_1qd3c9_q87bwqhg05s80000gn/T/pip-ephem-wheel-cache-_0jqacx4/wheels/a5/b8/b6/451f32abe96728b448365b4289261b6a436d79dd1ace71c4f1
Successfully built jbrowse-jupyter
Installing collected packages: dash, dash-jbrowse, jbrowse-jupyter
Attempting uninstall: dash
Found existing installation: dash 2.1.0
Uninstalling dash-2.1.0:
Successfully uninstalled dash-2.1.0
Attempting uninstall: dash-jbrowse
Found existing installation: dash-jbrowse 1.0.0
Uninstalling dash-jbrowse-1.0.0:
Successfully uninstalled dash-jbrowse-1.0.0
Successfully installed dash-2.0.0 dash-jbrowse-1.0.1 jbrowse-jupyter-1.2.1
WARNING: You are using pip version 21.3.1; however, version 22.0.3 is available.
You should consider upgrading via the '/Users/teresamartinez/opt/anaconda3/bin/python -m pip install --upgrade pip' command.