Notebook

Archiving of Panopea generosa (geoduck) genome data from BGI¶

Print system info¶

In [1]:

%%bash
system_profiler SPSoftwareDataType

Software:

    System Software Overview:

      System Version: Mac OS X 10.7.5 (11G63)
      Kernel Version: Darwin 11.4.2
      Boot Volume: SSD2
      Boot Mode: Normal
      Computer Name: greenbird (2)
      User Name: Sam (Sam)
      Secure Virtual Memory: Enabled
      64-bit Kernel and Extensions: No
      Time since boot: 6 days 22:21

List of files from BGI¶

In [3]:

%%bash
ls /Volumes/owl_home/F15FTSUSAT0328_PANwalD/

151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_1.fq.gz
151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_2.fq.gz
151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1.fq.gz
151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2.fq.gz
151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_1.fq.gz
151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_2.fq.gz
160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_1.fq.gz
160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_2.fq.gz
160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_1.fq.gz
160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_2.fq.gz
160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_1.fq.gz
160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_2.fq.gz
160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_1.fq.gz
160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_2.fq.gz
160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_1.fq.gz
160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_2.fq.gz
160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz
160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2.fq.gz
md5.txt

Generate checksums file to verify downloaded data remained intact.¶

In [4]:

%%bash

#For loop generates a md5 checksum has value for each file
#and appends the output to the checksums.md5 file.
time for file in /Volumes/owl_home/F15FTSUSAT0328_PANwalD/*.gz
    do
        md5 "$file" >> /Volumes/owl_home/F15FTSUSAT0328_PANwalD/checksums.md5
        done

real	59m45.654s
user	3m9.346s
sys	5m11.926s

View checksums.md5 file¶

In [5]:

%%bash
cat /Volumes/owl_home/F15FTSUSAT0328_PANwalD/checksums.md5

MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_1.fq.gz) = 4e95a487fd10e60ea5af7b62287f88a0
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_2.fq.gz) = ce78b1856aa612473de14a9599d0c4ff
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1.fq.gz) = a21f45349c1ebae6f8723d07613189cb
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2.fq.gz) = 23fcb4cda2aba74e97644a8cfac46a59
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_1.fq.gz) = 4b6225d3d0280fc9bf4161c6f86b5586
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_2.fq.gz) = b9f80f96fda43362da9ee08aced56bef
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_1.fq.gz) = b0dfe5ea6ded0272024d97bdc387f0d0
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_2.fq.gz) = 4d6dcf410e7a110d94fca646dff07ea7
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_1.fq.gz) = 146fcf32aac04eecc41671389e37ae61
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_2.fq.gz) = 62017aeb0276b3da77a4b014255a1bf8
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_1.fq.gz) = efcefa598dfc9230aa2f5b4d787388ee
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_2.fq.gz) = 0d3fabf04fc56e6249378fcddc286f06
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_1.fq.gz) = c2f4fa5c539cc028e4afdfd7765416ca
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_2.fq.gz) = 4a8fa8aee94bccf81e6f600b63935242
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_1.fq.gz) = 666f18e9cf0ba248e41bc089736932bb
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_2.fq.gz) = e73619c9bff1dbc816b6b17ca16518b1
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz) = 46f6762bafdeec810c12496c43f0c85c
MD5 (/Volumes/owl_home/F15FTSUSAT0328_PANwalD/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2.fq.gz) = 1da60e5843632956234b0a4cf10427f5

View md5.txt file from BGI¶

In [6]:

%%bash
cat /Volumes/owl_home/F15FTSUSAT0328_PANwalD/md5.txt

4e95a487fd10e60ea5af7b62287f88a0  151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_1.fq.gz
ce78b1856aa612473de14a9599d0c4ff  151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_2.fq.gz
a21f45349c1ebae6f8723d07613189cb  151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1.fq.gz
23fcb4cda2aba74e97644a8cfac46a59  151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2.fq.gz
4b6225d3d0280fc9bf4161c6f86b5586  151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_1.fq.gz
b9f80f96fda43362da9ee08aced56bef  151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_2.fq.gz
b0dfe5ea6ded0272024d97bdc387f0d0  160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_1.fq.gz
4d6dcf410e7a110d94fca646dff07ea7  160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_2.fq.gz
146fcf32aac04eecc41671389e37ae61  160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_1.fq.gz
62017aeb0276b3da77a4b014255a1bf8  160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_2.fq.gz
efcefa598dfc9230aa2f5b4d787388ee  160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_1.fq.gz
0d3fabf04fc56e6249378fcddc286f06  160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_2.fq.gz
c2f4fa5c539cc028e4afdfd7765416ca  160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_1.fq.gz
4a8fa8aee94bccf81e6f600b63935242  160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_2.fq.gz
666f18e9cf0ba248e41bc089736932bb  160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_1.fq.gz
e73619c9bff1dbc816b6b17ca16518b1  160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_2.fq.gz
46f6762bafdeec810c12496c43f0c85c  160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz
1da60e5843632956234b0a4cf10427f5  160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2.fq.gz

Save hash values from checksums.md5 and md5.txt to variables. Compare hash values from each to ensure they match (i.e. downloaded data is intact).¶

In [16]:

%%bash

#Use awk to print the 4th field (the checksum hash values) and saves the values to the new_checksums variable.
new_checksums=$( awk '{print $4}' /Volumes/owl_home/F15FTSUSAT0328_PANwalD/checksums.md5 )

#Use awk to print the 1st field (the checksum hash values) and saves the values to the original_checksums variable.
original_checksums=$( awk '{print $1}' /Volumes/owl_home/F15FTSUSAT0328_PANwalD/md5.txt)

#Print contents of new_checksums variable to verify the contents.
echo $new_checksums

#Print an empty line for improved readibility in the output.
echo ""

#Print contents of original_checksums variable to verify the contents.
echo $original_checksums

#Prints an empty line for improved readibility in the output.
echo ""


#Compare differences between the checksum hash values in each of the two variables.
#Uses the bash concept of process substitution "<(" to accomplish task using variable contents instead of two files.
diff <(echo "$new_checksums") <(echo "$original_checksums")

#Check exit status of last command executed (i.e. if diff command found no differences, then the output should be 0)
echo $?

4e95a487fd10e60ea5af7b62287f88a0 ce78b1856aa612473de14a9599d0c4ff a21f45349c1ebae6f8723d07613189cb 23fcb4cda2aba74e97644a8cfac46a59 4b6225d3d0280fc9bf4161c6f86b5586 b9f80f96fda43362da9ee08aced56bef b0dfe5ea6ded0272024d97bdc387f0d0 4d6dcf410e7a110d94fca646dff07ea7 146fcf32aac04eecc41671389e37ae61 62017aeb0276b3da77a4b014255a1bf8 efcefa598dfc9230aa2f5b4d787388ee 0d3fabf04fc56e6249378fcddc286f06 c2f4fa5c539cc028e4afdfd7765416ca 4a8fa8aee94bccf81e6f600b63935242 666f18e9cf0ba248e41bc089736932bb e73619c9bff1dbc816b6b17ca16518b1 46f6762bafdeec810c12496c43f0c85c 1da60e5843632956234b0a4cf10427f5

4e95a487fd10e60ea5af7b62287f88a0 ce78b1856aa612473de14a9599d0c4ff a21f45349c1ebae6f8723d07613189cb 23fcb4cda2aba74e97644a8cfac46a59 4b6225d3d0280fc9bf4161c6f86b5586 b9f80f96fda43362da9ee08aced56bef b0dfe5ea6ded0272024d97bdc387f0d0 4d6dcf410e7a110d94fca646dff07ea7 146fcf32aac04eecc41671389e37ae61 62017aeb0276b3da77a4b014255a1bf8 efcefa598dfc9230aa2f5b4d787388ee 0d3fabf04fc56e6249378fcddc286f06 c2f4fa5c539cc028e4afdfd7765416ca 4a8fa8aee94bccf81e6f600b63935242 666f18e9cf0ba248e41bc089736932bb e73619c9bff1dbc816b6b17ca16518b1 46f6762bafdeec810c12496c43f0c85c 1da60e5843632956234b0a4cf10427f5

0

Calculate total number of reads generated by this project¶

In [17]:

%%bash


totalreads=0 #Initializes variable.

#For loop counts the lines in each file and divides them by four. This is performed because
#Illumina sequencing files are composed of four lines per read.
#A running total of the total number of reads is generated [totalreads=$((readcount+totalreads))]
#and is printed after the for loop completes.
time for file in /Volumes/owl_home/F15FTSUSAT0328_PANwalD/*.gz
    do linecount=`gunzip -c "$file" | wc -l`
    readcount=$((linecount/4))
    totalreads=$((readcount+totalreads))
done
echo $totalreads

1208635950

real	88m45.398s
user	41m59.646s
sys	7m44.336s

Calculate number of reads per file and, append filename and corresponding number of reads to readme file¶

In [1]:

%%bash

#For loop counts the lines in each file and divides them by four. This is performed because
#Illumina sequencing files are composed of four lines per read.
#Format the output (printf) to print the filename, followed by a tab, followed by the readcount.
#The command "tee -a" is used to both print the output to the screen and append the output to the readme.md file.
time for file in /Volumes/owl_home/F15FTSUSAT0328_PANwalD/*.gz
    do linecount=`gunzip -c "$file" | wc -l`
    readcount=$(($linecount/4))
    printf "%s\t%s\n\n" "${file##*/}" "$readcount" | tee -a /Volumes/owl_web/nightingales/P_generosa/readme.md
done

151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_1.fq.gz	94337047

151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_2.fq.gz	94337047

151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1.fq.gz	72605592

151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2.fq.gz	72605592

151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_1.fq.gz	77590326

151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_2.fq.gz	77590326

160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_1.fq.gz	62782565

160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_2.fq.gz	62782565

160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_1.fq.gz	63723614

160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_2.fq.gz	63723614

160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_1.fq.gz	75775638

160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_2.fq.gz	75775638

160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_1.fq.gz	41762399

160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_2.fq.gz	41762399

160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_1.fq.gz	73632218

160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_2.fq.gz	73632218

160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz	42108576

160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2.fq.gz	42108576

real	69m1.578s
user	36m27.697s
sys	4m39.632s

Move .gz files to web accessible location on Owl¶

In [20]:

%%bash

mv -n /Volumes/owl_home/F15FTSUSAT0328_PANwalD/*.gz /Volumes/owl_web/nightingales/P_generosa/

mv: /Volumes/owl_web/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1.fq.gz: set owner/group (was: 502/20): Operation not permitted
mv: /Volumes/owl_web/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2.fq.gz: set owner/group (was: 502/20): Operation not permitted
mv: /Volumes/owl_web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz: set owner/group (was: 502/20): Operation not permitted
mv: /Volumes/owl_web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2.fq.gz: set owner/group (was: 502/20): Operation not permitted

List files in Owl/web/nightingales/O_lurida¶

In [25]:

%%bash

#List the files from this project (grep FCH3*), showing human-readable file sizes,
#and get rid of file permission info in output (cut -d ' ' -f7)
ls -lh /Volumes/owl_web/nightingales/P_generosa/ | grep 'FCH3*' | cut -d ' ' -f7-

  9.8G Jan 25 01:01 151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_1.fq.gz
   10G Jan 25 01:33 151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_2.fq.gz
  7.8G Jan 25 00:52 151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1.fq.gz
  8.1G Jan 25 00:47 151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2.fq.gz
  6.3G Jan 25 01:10 151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_1.fq.gz
  7.1G Jan 25 01:03 151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_2.fq.gz
  1.7G Jan 25 01:04 160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_1.fq.gz
  1.9G Jan 25 01:07 160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_2.fq.gz
  1.8G Jan 25 01:08 160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_1.fq.gz
  1.9G Jan 25 01:11 160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_2.fq.gz
  2.0G Jan 25 01:12 160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_1.fq.gz
  2.2G Jan 25 01:14 160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_2.fq.gz
  1.2G Jan 25 01:14 160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_1.fq.gz
  1.3G Jan 25 01:14 160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_2.fq.gz
  2.0G Jan 25 01:18 160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_1.fq.gz
  1.8G Jan 27 13:54 160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_2.fq.gz
  1.2G Jan 25 01:17 160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz
  1.3G Jan 25 01:20 160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2.fq.gz

Append new checksums to existing checksums file in Owl/nightingales/O_lurida¶

In [22]:

cat /Volumes/owl_home/F15FTSUSAT0328_PANwalD/checksums.md5 >> /Volumes/owl_web/nightingales/P_generosa/checksums.md5

Verify checksums were added to Owl/web/nightingales/O_lurida/checksums.md5¶

In [23]:

cat /Volumes/owl_web/nightingales/O_lurida/checksums.md5 | grep 'FCH3*'

MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37_1.fq.gz) = 810d188468dbd8bb36b2af3bf3b9fee6
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37_2.fq.gz) = cf92b18e0815dc0471d61f9107142257
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66_1.fq.gz) = 3dc2137d7df0af8d6a007516908361a3
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66_2.fq.gz) = 8bc0d7c7a7af3954baca31a4a7fe9f2b
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96_1.fq.gz) = 08cfdc6fdc5a6190cb05cdcb81fa5b9c
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96_2.fq.gz) = a503043167457337a65d51151ceb5dd0
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62_1.fq.gz) = a0c0177a7a4a4ca28c37bd3802361564
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62_2.fq.gz) = 74e51d608de7a409a29545a95ac3ec14
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75_1.fq.gz) = e829da6f7e7a047586802a05d3b96d18
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75_2.fq.gz) = 74953d0143c392f111eec178667d3fcd
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62_1.fq.gz) = 9b5f7c1593f216f710814c299738493f
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62_2.fq.gz) = 5a6392d9c23aa85d170d7f50de4f0b54
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75_1.fq.gz) = 2cf349b55558e7424fa0ed029ae0bfca
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75_2.fq.gz) = 5cb745671596d5d5d307986d35ea9792
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74_1.fq.gz) = b371a3b3588060bb2200f5caaf9a9d5c
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74_2.fq.gz) = dd8b0fef21fc5e330d08ae4a48c8d67b
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74_1.fq.gz) = 50b5dbff9426738005b81efd49d66329
MD5 (/Volumes/owl_home/O_lurida_BGI_F15FTSUSAT0327_OSTibkD/160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74_2.fq.gz) = 29be6e734ad65c180aee23d1514c5c35

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