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andim's
repositories
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tcrdist
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.gitignore
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DistanceCalculator.py
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LICENSE.txt
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README.md
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all_genes.py
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amino_acids.py
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analyze_epitope_privacy.py
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analyze_gene_frequencies.py
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analyze_overlap_compute_simpsons.py
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api.md
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basic.py
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blast.py
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cdr3s_human.py
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compute_distances.py
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compute_probs.py
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create_and_run_testing_datasets.py
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file_converter.py
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find_cdr3_motifs.py
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find_clones.py
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genetic_code.py
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html_colors.py
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logo_tools.py
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make_gene_plots.py
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make_kpca_plots.py
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make_mouse_table.py
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make_really_tall_trees.py
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make_summary_table.py
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make_tall_trees.py
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parse_cdr3.py
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parse_tsv.py
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paths.py
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plot_nbrdist_distributions.py
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plot_sharing.py
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random_tcr_distances.py
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read_motifs.py
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read_nextgen_matches.py
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read_pair_seqs.py
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read_random_tcr_distances.py
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read_read_nextgen_matches.py
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read_sanger_data.py
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rerun_paper_analysis.py
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run_basic_analysis.py
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score_trees_devel.py
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setup.py
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setup_classic_db.py
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setup_gammadelta_db.py
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setup_nextgen_sequence_files.py
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setup_nextgen_tuple_counts.py
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svg_basic.py
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tcr_distances.py
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tcr_distances_blosum.py
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tcr_rearrangement.py
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tcr_rearrangement_new.py
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tcr_sampler.py
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translation.py
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util.py
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