|
jbloomlab's
repositories
|
|
MaveDB_upload
|
|
SRA_upload
|
|
data
|
|
docs
|
|
results
|
|
scripts
|
|
structural_views
|
|
analyze_counts.ipynb
|
|
build_variants.ipynb
|
|
count_variants.ipynb
|
|
global_epistasis_binding.ipynb
|
|
global_epistasis_expression.ipynb
|
|
interactive_heatmap.ipynb
|
|
logoplots_of_muteffects.ipynb
|
|
process_ccs.ipynb
|
|
.gitattributes
|
|
.gitignore
|
|
LICENSE.md
|
|
README.md
|
|
Snakefile
|
|
antibody_epitopes.Rmd
|
|
circulating_variants.Rmd
|
|
cluster.yaml
|
|
compute_binding_Kd.Rmd
|
|
compute_expression_meanF.Rmd
|
|
config.yaml
|
|
environment.yml
|
|
environment_unpinned.yml
|
|
logomaker_utils.py
|
|
run_Hutch_cluster.bash
|
|
sarbecovirus_diversity.Rmd
|
|
single_mut_effects.Rmd
|
|
structure_function.Rmd
|