Data loading and visualization

import JupyterNotebooksLib as slicernb

# Set image viewer size to 50% (fill half of a cell)
slicernb.AppWindow.setWindowSize(scale=0.5)
# Hide patient information from slice view
slicernb.showSliceViewAnnotations(False)

3D volume display

# Clear scene
slicer.mrmlScene.Clear(False)

# Load a Slicer sample data set
import SampleData
volume = SampleData.SampleDataLogic().downloadMRBrainTumor1()

print("Volume size: {0}".format(volume.GetImageData().GetDimensions()))

Volume size: (256, 256, 112)

# Show slice view
slicernb.ViewDisplay("OneUpRedSlice")

# Lightbox view
slicernb.ViewLightboxDisplay("Red", columns=5, rows=3, rangeShrink=[45,50])