|
mwcraig's
repositories
|
|
README.md
|
|
abyss.rb
|
|
adol-c.rb
|
|
allpaths-lg.rb
|
|
amos.rb
|
|
analysis.rb
|
|
ann.rb
|
|
armadillo.rb
|
|
arow++.rb
|
|
astrometry.net.rb
|
|
atlas.rb
|
|
bact.rb
|
|
bali-phy.rb
|
|
bam-readcount.rb
|
|
bamtools.rb
|
|
bamutil.rb
|
|
beagle.rb
|
|
bedops.rb
|
|
bedtools.rb
|
|
bioawk.rb
|
|
bitseq.rb
|
|
blast.rb
|
|
blat.rb
|
|
bowtie.rb
|
|
bowtie2.rb
|
|
bwa.rb
|
|
bwtdisk.rb
|
|
cd-hit.rb
|
|
cddlib.rb
|
|
cdsclient.rb
|
|
celera-assembler.rb
|
|
ceres-solver.rb
|
|
cgns.rb
|
|
clustal-omega.rb
|
|
clustal-w.rb
|
|
cminpack.rb
|
|
coinmp.rb
|
|
coinutils.rb
|
|
colpack.rb
|
|
crfsuite.rb
|
|
cufflinks.rb
|
|
dadadodo.rb
|
|
dssp.rb
|
|
edena.rb
|
|
elph.rb
|
|
emboss.rb
|
|
fann.rb
|
|
fast-statistical-alignment.rb
|
|
fasta.rb
|
|
fastqc.rb
|
|
fasttree.rb
|
|
fastx_toolkit.rb
|
|
fermi.rb
|
|
flann.rb
|
|
gal-sim.rb
|
|
galib.rb
|
|
gfan.rb
|
|
glimmer3.rb
|
|
glpk.rb
|
|
gmap-gsnap.rb
|
|
gtsam.rb
|
|
hmmer.rb
|
|
hopdm.rb
|
|
hyphy.rb
|
|
igraph.rb
|
|
infernal.rb
|
|
insighttoolkit.rb
|
|
jellyfish.rb
|
|
kalign.rb
|
|
kmergenie.rb
|
|
lammps.rb
|
|
lastz.rb
|
|
liblbfgs.rb
|
|
libsequence.rb
|
|
libtsnnls.rb
|
|
lp_solve.rb
|
|
mafft.rb
|
|
mallet.rb
|
|
masurca.rb
|
|
mathgl.rb
|
|
mathomatic.rb
|
|
maxima.rb
|
|
mcl.rb
|
|
meme.rb
|
|
metis.rb
|
|
metis4.rb
|
|
minia.rb
|
|
mira.rb
|
|
mpsolve.rb
|
|
mrbayes.rb
|
|
mrfast.rb
|
|
mtl.rb
|
|
mummer.rb
|
|
muscle.rb
|
|
nauty.rb
|
|
nco.rb
|
|
niftilib.rb
|
|
novoalign.rb
|
|
octave.rb
|
|
openblas.rb
|
|
opencv.rb
|
|
openimageio.rb
|
|
paml.rb
|
|
parmetis.rb
|
|
perf.rb
|
|
petsc.rb
|
|
phylip.rb
|
|
phyml.rb
|
|
picard-tools.rb
|
|
plink.rb
|
|
pmw.rb
|
|
populations.rb
|
|
prank.rb
|
|
primer3.rb
|
|
prodigal.rb
|
|
pymol.rb
|
|
qgis.rb
|
|
qhull.rb
|
|
quast.rb
|
|
quicktree.rb
|
|
quip.rb
|
|
radx.rb
|
|
rainbow.rb
|
|
raxml.rb
|
|
ray.rb
|
|
rml-mmc.rb
|
|
samtools.rb
|
|
scalapack.rb
|
|
scotch.rb
|
|
seq-gen.rb
|
|
seqan.rb
|
|
seqdb.rb
|
|
seqtk.rb
|
|
sextractor.rb
|
|
sga.rb
|
|
shogun.rb
|
|
sickle.rb
|
|
sllib.rb
|
|
snp_sites.rb
|
|
snpeff.rb
|
|
soapdenovo.rb
|
|
spades.rb
|
|
spatialite-gis.rb
|
|
sratoolkit.rb
|
|
suite-sparse.rb
|
|
symphony.rb
|
|
tabix.rb
|
|
tmv-cpp.rb
|
|
tophat.rb
|
|
transtermhp.rb
|
|
triangle.rb
|
|
trilinos.rb
|
|
trinity.rb
|
|
trnascan.rb
|
|
ucsc-genome-browser.rb
|
|
unafold.rb
|
|
vcftools.rb
|
|
velvet.rb
|
|
velvetoptimiser.rb
|
|
viennarna.rb
|
|
vigra.rb
|
|
vips.rb
|
|
voro++.rb
|
|
vtk.rb
|
|
wcslib.rb
|
|
wcstools.rb
|
|
wxmaxima.rb
|
|
xmgredit.rb
|