Following interactive heatmap represents the 687 DE proteins between ENRC and ENRI.
Under the Type_Where heading, we have summarized the type of cells and its location.

Reference¶

Fernandez, N. F. et al. Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data. Sci. Data 4:170151 doi:10.1038/sdata.2017.151 (2017)

In [1]:

import pandas as pd
from clustergrammer_widget import *
net = Network(clustergrammer_widget)

In [2]:

from clustergrammer2 import net

>> clustergrammer2 backend version 0.18.0

In [3]:

# load our data
net.load_file('MG.tsv')

In [4]:

# check shape of data
net.dat['mat'].shape

Out[4]:

(686, 6)

In [5]:

net.cluster(views=[])

In [6]:

net.widget()

CGM2(network='{"row_nodes": [{"name": "Gene: Aacs", "ini": 686, "clust": 209, "rank": 570, "rankvar": 237, "ca…

Clustergrammer-Widget based interactive heatmap¶

Reference¶