Table of Contents¶

Newton's Method and Fisher Scoring (KL Chapter 14)¶

Consider maximizing log-likelihood function $L(\mathbf{\theta})$, $\theta \in \Theta \subset \mathbb{R}^p$.

Notations¶

• Gradient (or score) of $L$: $$ \nabla L(\theta) = \begin{pmatrix} \frac{\partial L(\theta)}{\partial \theta_1} \\ \vdots \\ \frac{\partial L(\theta)}{\partial \theta_p} \end{pmatrix} $$

• Differential of $L$: $$ dL(\theta) = [\nabla L(\theta)]^T $$

• Hessian of $L$:
  $$ \nabla^2 L(\theta) = d^2 L(\theta) = \begin{pmatrix} \frac{\partial^2 L(\theta)}{\partial \theta_1 \partial \theta_1} & \dots & \frac{\partial^2 L(\theta)}{\partial \theta_1 \partial \theta_p} \\ \vdots & \ddots & \vdots \\ \frac{\partial^2 L(\theta)}{\partial \theta_p \partial \theta_1} & \dots & \frac{\partial^2 L(\theta)}{\partial \theta_p \partial \theta_p} \end{pmatrix} $$

• Observed information matrix:

$$ - \nabla^2 L(\theta) = - d^2 L(\theta). $$

• Expected (Fisher) information matrix:

$$ \mathbf{E}[- \nabla^2 L(\theta)] = \mathbf{E}[- d^2 L(\theta)]. $$

Newton's method¶

• Newton's method was originally developed for finding roots of nonlinear equations

$f(\mathbf{x}) = \mathbf{0}$ (KL 5.4).

• Newton's method, aka Newton-Raphson method, is considered the gold standard for its fast (quadratic) convergence

$$ \frac{\|\mathbf{\theta}^{(t+1)} - \mathbf{\theta}^*\|}{\|\mathbf{\theta}^{(t)} - \mathbf{\theta}^*\|^2} \to \text{constant}. $$

• Idea: iterative quadratic approximation.

• Taylor expansion around the current iterate $\mathbf{\theta}^{(t)}$

$$ L(\mathbf{\theta}) \approx L(\mathbf{\theta}^{(t)}) + dL(\mathbf{\theta}^{(t)}) (\mathbf{\theta} - \mathbf{\theta}^{(t)}) + \frac 12 (\mathbf{\theta} - \mathbf{\theta}^{(t)})^T d^2L(\mathbf{\theta}^{(t)}) (\mathbf{\theta} - \mathbf{\theta}^{(t)}) $$

and then maximize the quadratic approximation.

• To maximize the quadratic function, we equate its gradient to zero

$$ \nabla L(\theta^{(t)}) + [d^2L(\theta^{(t)})] (\theta - \theta^{(t)}) = \mathbf{0}_p, $$

which suggests the next iterate $$ \begin{eqnarray*} \theta^{(t+1)} &=& \theta^{(t)} - [d^2L(\theta^{(t)})]^{-1} \nabla L(\theta^{(t)}) \\ &=& \theta^{(t)} + [-d^2L(\theta^{(t)})]^{-1} \nabla L(\theta^{(t)}). \end{eqnarray*} $$ We call this naive Newton's method.

• Stability issue: naive Newton's iterate is not guaranteed to be an ascent algorithm. It's equally happy to head uphill or downhill. Remedies:
  0. approximate $-d^2L(\theta^{(t)})$ by a positive definite $\mathbf{A}$ (if it's not), and 0. line search (backtracking).

Why insist on a positive definite approximation of Hessian? By first-order Taylor expansion, $$ \begin{eqnarray*} & & L(\theta^{(t)} + s \Delta \theta^{(t)}) - L(\theta^{(t)}) \\ &=& dL(\theta^{(t)}) s \Delta \theta^{(t)} + o(s) \\ &=& s dL(\theta^{(t)}) [\mathbf{A}^{(t)}]^{-1} \nabla L(\theta^{(t)}) + o(s). \end{eqnarray*} $$ For $s$ sufficiently small, right hand side is strictly positive when $\mathbf{A}^{(t)}$ is positive definite.

• In summary, a Newton-type algorithm iterates according to

$$ \boxed{ \theta^{(t+1)} = \theta^{(t)} + s [\mathbf{A}^{(t)}]^{-1} \nabla L(\theta^{(t)}) = \theta^{(t)} + s \Delta \theta^{(t)} } $$

where $\mathbf{A}^{(t)}$ is a pd approximation of $-d^2L(\theta^{(t)})$ and $s$ is a step length.

• For strictly concave $L$, $-d^2L(\theta^{(t)})$ is always positive definite. Line search is still needed to guarantee convergence.

• Line search strategy: step-halving ($s=1,1/2,\ldots$), golden section search, cubic interpolation, Amijo rule, ... Note the Newton direction

$$ \Delta \theta^{(t)} = [\mathbf{A}^{(t)}]^{-1} \nabla L(\theta^{(t)}) $$

only needs to be calculated once. Cost of line search mainly lies in objective function evaluation.

• How to approximate $-d^2L(\theta)$? More of an art than science. Often requires problem specific analysis.

• Taking $\mathbf{A} = \mathbf{I}$ leads to the method of steepest ascent, aka gradient ascent.

Fisher's scoring method¶

• Fisher's scoring method: replace $-d^2L(\theta)$ by the expected Fisher information matrix

$$ \mathbf{I}(\theta) = \mathbf{E}[-d^2L(\theta)] = \mathbf{E}[\nabla L(\theta) dL(\theta)] \succeq \mathbf{0}_{p \times p}, $$

which is psd under exchangeability of expectation and differentiation.

Therefore the Fisher's scoring algorithm iterates according to

$$ \boxed{ \theta^{(t+1)} = \theta^{(t)} + s [\mathbf{I}(\theta^{(t)})]^{-1} \nabla L(\theta^{(t)})}. $$

Generalized linear model (GLM) (KL 14.7)¶

Logistic regression¶

Let's consider a concrete example: logistic regression.

• The goal is to predict whether a credit card transaction is fraud ($y_i=1$) or not ($y_i=0$). Predictors ($\mathbf{x}_i$) include: time of transaction, last location, merchant, ...

• $y_i \in \{0,1\}$, $\mathbf{x}_i \in \mathbb{R}^{p}$. Model $y_i \sim $Bernoulli$(p_i)$.

• Logistic regression. Density

$$ \begin{eqnarray*} f(y_i|p_i) &=& p_i^{y_i} (1-p_i)^{1-y_i} \\ &=& e^{y_i \ln p_i + (1-y_i) \ln (1-p_i)} \\ &=& e^{y_i \ln \frac{p_i}{1-p_i} + \ln (1-p_i)}, \end{eqnarray*} $$

where $$ \begin{eqnarray*} \mathbf{E} (y_i) = p_i &=& \frac{e^{\mathbf{x}_i^T \beta}}{1+ e^{\mathbf{x}_i^T \beta}} \quad \text{(mean function, inverse link function)} \\ \mathbf{x}_i^T \beta &=& \ln \left( \frac{p_i}{1-p_i} \right) \quad \text{(logit link function)}. \end{eqnarray*} $$

• Given data $(y_i,\mathbf{x}_i)$, $i=1,\ldots,n$,

$$ \begin{eqnarray*} L_n(\beta) &=& \sum_{i=1}^n \left[ y_i \ln p_i + (1-y_i) \ln (1-p_i) \right] \\ &=& \sum_{i=1}^n \left[ y_i \mathbf{x}_i^T \beta - \ln (1 + e^{\mathbf{x}_i^T \beta}) \right] \\ \nabla L_n(\beta) &=& \sum_{i=1}^n \left( y_i \mathbf{x}_i - \frac{e^{\mathbf{x}_i^T \beta}}{1+e^{\mathbf{x}_i^T \beta}} \mathbf{x}_i \right) \\ &=& \sum_{i=1}^n (y_i - p_i) \mathbf{x}_i = \mathbf{X}^T (\mathbf{y} - \mathbf{p}) \\ - d^2L_n(\beta) &=& \sum_{i=1}^n p_i(1-p_i) \mathbf{x}_i \mathbf{x}_i^T = \mathbf{X}^T \mathbf{W} \mathbf{X}, \quad \text{where } \mathbf{W} &=& \text{diag}(w_1,\ldots,w_n), w_i = p_i (1-p_i) \\ \mathbf{I}_n(\beta) &=& \mathbf{E} [- d^2L_n(\beta)] = - d^2L_n(\beta). \end{eqnarray*} $$

• Newton's method == Fisher's scoring iteration:

$$ \begin{eqnarray*} \beta^{(t+1)} &=& \beta^{(t)} + s[-d^2 L(\beta^{(t)})]^{-1} \nabla L(\beta^{(t)}) \\ &=& \beta^{(t)} + s(\mathbf{X}^T \mathbf{W}^{(t)} \mathbf{X})^{-1} \mathbf{X}^T (\mathbf{y} - \mathbf{p}^{(t)}) \\ &=& (\mathbf{X}^T \mathbf{W}^{(t)} \mathbf{X})^{-1} \mathbf{X}^T \mathbf{W}^{(t)} \left[ \mathbf{X} \beta^{(t)} + s(\mathbf{W}^{(t)})^{-1} (\mathbf{y} - \mathbf{p}^{(t)}) \right] \\ &=& (\mathbf{X}^T \mathbf{W}^{(t)} \mathbf{X})^{-1} \mathbf{X}^T \mathbf{W}^{(t)} \mathbf{z}^{(t)}, \end{eqnarray*} $$

where $$ \mathbf{z}^{(t)} = \mathbf{X} \beta^{(t)} + s(\mathbf{W}^{(t)})^{-1} (\mathbf{y} - \mathbf{p}^{(t)}) $$ are the working responses. A Newton's iteration is equivalent to solving a weighed least squares problem $\sum_{i=1}^n w_i (z_i - \mathbf{x}_i^T \beta)^2$. Thus the name IRWLS (iteratively re-weighted least squares).

GLM¶

Let's consider the more general class of generalized linear models (GLM).

Family	Canonical Link	Variance Function
Normal	$\eta=\mu$	1
Poisson	$\eta=\log \mu$	$\mu$
Binomial	$\eta=\log \left( \frac{\mu}{1 - \mu} \right)$	$\mu (1 - \mu)$
Gamma	$\eta = \mu^{-1}$	$\mu^2$
Inverse Gaussian	$\eta = \mu^{-2}$	$\mu^3$

• $Y$ belongs to an exponential family with density

$$ p(y|\theta,\phi) = \exp \left\{ \frac{y\theta - b(\theta)}{a(\phi)} + c(y,\phi) \right\}. $$

* $\theta$: natural parameter.  
* $\phi>0$: dispersion parameter.  

GLM relates the mean $\mu = \mathbf{E}(Y|\mathbf{x})$ via a strictly increasing link function $$ g(\mu) = \eta = \mathbf{x} \beta, \quad \mu = g^{-1}(\eta) $$

• Score, Hessian, information

$$ \begin{eqnarray*} \nabla L_n(\beta) &=& \sum_{i=1}^n \frac{(y_i-\mu_i) \mu_i'(\eta_i)}{\sigma_i^2} \mathbf{x}_i \\ - d^2 L_n(\beta) &=& \sum_{i=1}^n \frac{[\mu_i'(\eta_i)]^2}{\sigma_i^2} \mathbf{x}_i \mathbf{x}_i^T - \sum_{i=1}^n \frac{(y_i - \mu_i) \theta''(\eta_i)}{\sigma_i^2} \mathbf{x}_i \mathbf{x}_i^T \\ \mathbf{I}_n(\beta) &=& \mathbf{E} [- d^2 L_n(\beta)] = \sum_{i=1}^n \frac{[\mu_i'(\eta_i)]^2}{\sigma_i^2} \mathbf{x}_i \mathbf{x}_i^T = \mathbf{X}^T \mathbf{W} \mathbf{X}. \end{eqnarray*} $$

• Fisher scoring method

$$ \beta^{(t+1)} = \beta^{(t)} + s [\mathbf{I}(\beta^{(t)})]^{-1} \nabla L_n(\beta^{(t)}) $$

IRWLS with weights $w_i = [\mu_i(\eta_i)]^2/\sigma_i^2$ and some working responses $z_i$.

• For canonical link, $\theta = \eta$, the second term of Hessian vanishes and Hessian coincides with Fisher information matrix. Convex problem 😄

$$ \text{Fisher's scoring = Newton's method}. $$

• Non-canonical link, non-convex problem 😞

$$ \text{Fisher's scoring algorithm} \ne \text{Newton's method}. $$

Example: Probit regression (binary response with probit link). $$ \begin{eqnarray*} y_i &\sim& \text{Bernoulli}(p_i) \\ p_i &=& \Phi(\mathbf{x}_i^T \beta) \\ \eta_i &=& \mathbf{x}_i^T \beta = \Phi^{-1}(p_i). \end{eqnarray*} $$ where $\Phi(\cdot)$ is the cdf of a standard normal.

• Julia, R and Matlab implement the Fisher scoring method, aka IRWLS, for GLMs.
  • GLM.jl package.

Nonlinear regression - Gauss-Newton method (KL 14.4-14.6)¶

• Now we finally get to the problem Gauss faced in 1800!

Relocate Ceres by fitting 41 observations to a 6-parameter (nonlinear) orbit.

• Nonlinear least squares (curve fitting):

$$ \text{minimize} \,\, f(\beta) = \frac{1}{2} \sum_{i=1}^n [y_i - \mu_i(\mathbf{x}_i, \beta)]^2 $$

For example, $y_i =$ dry weight of onion and $x_i=$ growth time, and we want to fit a 3-parameter growth curve $$ \mu(x, \beta_1,\beta_2,\beta_3) = \frac{\beta_3}{1 + e^{-\beta_1 - \beta_2 x}}. $$

• "Score" and "information matrices"

$$ \begin{eqnarray*} \nabla f(\beta) &=& - \sum_{i=1}^n [y_i - \mu_i(\beta)] \nabla \mu_i(\beta) \\ d^2 f(\beta) &=& \sum_{i=1}^n \nabla \mu_i(\beta) d \mu_i(\beta) - \sum_{i=1}^n [y_i - \mu_i(\beta)] d^2 \mu_i(\beta) \\ \mathbf{I}(\beta) &=& \sum_{i=1}^n \nabla \mu_i(\beta) d \mu_i(\beta) = \mathbf{J}(\beta)^T \mathbf{J}(\beta), \end{eqnarray*} $$

where $\mathbf{J}(\beta)^T = [\nabla \mu_1(\beta), \ldots, \nabla \mu_n(\beta)] \in \mathbb{R}^{p \times n}$.

• Gauss-Newton (= "Fisher's scoring algorithm") uses $\mathbf{I}(\beta)$, which is always psd.

$$ \boxed{ \beta^{(t+1)} = \beta^{(t)} + s [\mathbf{I} (\beta^{(t)})]^{-1} \nabla L(\beta^{(t)}) } $$

• Levenberg-Marquardt method, aka damped least squares algorithm (DLS), adds a ridge term to the approximate Hessian

$$ \boxed{ \beta^{(t+1)} = \beta^{(t)} + s [\mathbf{I} (\beta^{(t)}) + \tau \mathbf{I}_p]^{-1} \nabla L(\beta^{(t)}) } $$

bridging between Gauss-Newton and steepest descent.

• Other approximation to Hessians: nonlinear GLMs.

See KL 14.4 for examples.