StandardHistFactoryPlotsWithCategories
This is a standard demo that can be used with any ROOT file prepared in the standard way. You specify:
name of dataset
With default parameters the macro will attempt to run the standard hist2workspace example and read the ROOT file that it produces.
The macro will scan through all the categories in a simPdf find the corresponding observable. For each category, it will loop through each of the nuisance parameters and plot
the -Nsigma (green)
You can specify how many sigma to vary by changing nSigmaToVary. You can also change the signal rate by changing muVal.
The script produces a lot plots, you can merge them by doing:
gs -q -dNOPAUSE -dBATCH -sDEVICE=pdfwrite -sOutputFile=merged.pdf `ls *pdf`
Author: Kyle Cranmer
This notebook tutorial was automatically generated with ROOTBOOK-izer from the macro found in the ROOT repository on Thursday, June 30, 2022 at 10:02 AM.
%%cpp -d
#include "TFile.h"
#include "TROOT.h"
#include "TCanvas.h"
#include "TList.h"
#include "TMath.h"
#include "TSystem.h"
#include "RooWorkspace.h"
#include "RooAbsData.h"
#include "RooRealVar.h"
#include "RooPlot.h"
#include "RooSimultaneous.h"
#include "RooCategory.h"
#include "RooStats/ModelConfig.h"
#include "RooStats/ProfileInspector.h"
%%cpp -d
// This is a workaround to make sure the namespace is used inside functions
using namespace RooFit;
using namespace RooStats;
using namespace std;
Arguments are defined.
const char *infile = "";
const char *workspaceName = "combined";
const char *modelConfigName = "ModelConfig";
const char *dataName = "obsData";
double nSigmaToVary = 5.;
double muVal = 0;
bool doFit = false;
First part is just to access a user-defined file or create the standard example file if it doesn't exist
const char *filename = "";
if (!strcmp(infile, "")) {
filename = "results/example_combined_GaussExample_model.root";
bool fileExist = !gSystem->AccessPathName(filename); // note opposite return code
// if file does not exists generate with histfactory
if (!fileExist) {
#ifdef _WIN32
cout << "HistFactory file cannot be generated on Windows - exit" << endl;
return;
#endif
// Normally this would be run on the command line
cout << "will run standard hist2workspace example" << endl;
gROOT->ProcessLine(".! prepareHistFactory .");
gROOT->ProcessLine(".! hist2workspace config/example.xml");
cout << "\n\n---------------------" << endl;
cout << "Done creating example input" << endl;
cout << "---------------------\n\n" << endl;
}
} else
filename = infile;
Try to open the file
TFile *file = TFile::Open(filename);
If input file was specified byt not found, quit
if (!file) {
cout << "StandardRooStatsDemoMacro: Input file " << filename << " is not found" << endl;
return;
}
Get the workspace out of the file
RooWorkspace *w = (RooWorkspace *)file->Get(workspaceName);
if (!w) {
cout << "workspace not found" << endl;
return;
}
Get the modelconfig out of the file
ModelConfig *mc = (ModelConfig *)w->obj(modelConfigName);
Get the modelconfig out of the file
RooAbsData *data = w->data(dataName);
Make sure ingredients are found
if (!data || !mc) {
w->Print();
cout << "data or ModelConfig was not found" << endl;
return;
}
now use the profile inspector
RooRealVar *obs = (RooRealVar *)mc->GetObservables()->first();
TList *list = new TList();
RooRealVar *firstPOI = dynamic_cast<RooRealVar *>(mc->GetParametersOfInterest()->first());
firstPOI->setVal(muVal);
Firstpoi->setconstant();
if (doFit) {
mc->GetPdf()->fitTo(*data);
}
mc->GetNuisanceParameters()->Print("v");
int nPlotsMax = 1000;
cout << " check expectedData by category" << endl;
RooDataSet *simData = NULL;
RooSimultaneous *simPdf = NULL;
if (strcmp(mc->GetPdf()->ClassName(), "RooSimultaneous") == 0) {
cout << "Is a simultaneous PDF" << endl;
simPdf = (RooSimultaneous *)(mc->GetPdf());
} else {
cout << "Is not a simultaneous PDF" << endl;
}
if (doFit) {
RooCategory *channelCat = (RooCategory *)(&simPdf->indexCat());
TIterator *iter = channelCat->typeIterator();
RooCatType *tt = NULL;
tt = (RooCatType *)iter->Next();
RooAbsPdf *pdftmp = ((RooSimultaneous *)mc->GetPdf())->getPdf(tt->GetName());
RooArgSet *obstmp = pdftmp->getObservables(*mc->GetObservables());
obs = ((RooRealVar *)obstmp->first());
RooPlot *frame = obs->frame();
cout << Form("%s==%s::%s", channelCat->GetName(), channelCat->GetName(), tt->GetName()) << endl;
cout << tt->GetName() << " " << channelCat->getLabel() << endl;
data->plotOn(frame, MarkerSize(1),
Cut(Form("%s==%s::%s", channelCat->GetName(), channelCat->GetName(), tt->GetName())),
DataError(RooAbsData::None));
Double_t normCount =
data->sumEntries(Form("%s==%s::%s", channelCat->GetName(), channelCat->GetName(), tt->GetName()));
pdftmp->plotOn(frame, LineWidth(2.), Normalization(normCount, RooAbsReal::NumEvent));
frame->Draw();
cout << "expected events = " << mc->GetPdf()->expectedEvents(*data->get()) << endl;
return;
}
int nPlots = 0;
if (!simPdf) {
TIter it = mc->GetNuisanceParameters()->createIterator();
RooRealVar *var = NULL;
while ((var = (RooRealVar *)it.Next()) != NULL) {
RooPlot *frame = obs->frame();
frame->SetYTitle(var->GetName());
data->plotOn(frame, MarkerSize(1));
var->setVal(0);
mc->GetPdf()->plotOn(frame, LineWidth(1.));
var->setVal(1);
mc->GetPdf()->plotOn(frame, LineColor(kRed), LineStyle(kDashed), LineWidth(1));
var->setVal(-1);
mc->GetPdf()->plotOn(frame, LineColor(kGreen), LineStyle(kDashed), LineWidth(1));
list->Add(frame);
var->setVal(0);
}
} else {
RooCategory *channelCat = (RooCategory *)(&simPdf->indexCat());
// TIterator* iter = simPdf->indexCat().typeIterator() ;
TIterator *iter = channelCat->typeIterator();
RooCatType *tt = NULL;
while (nPlots < nPlotsMax && (tt = (RooCatType *)iter->Next())) {
cout << "on type " << tt->GetName() << " " << endl;
// Get pdf associated with state from simpdf
RooAbsPdf *pdftmp = simPdf->getPdf(tt->GetName());
// Generate observables defined by the pdf associated with this state
RooArgSet *obstmp = pdftmp->getObservables(*mc->GetObservables());
// obstmp->Print();
obs = ((RooRealVar *)obstmp->first());
TIter it = mc->GetNuisanceParameters()->createIterator();
RooRealVar *var = NULL;
while (nPlots < nPlotsMax && (var = (RooRealVar *)it.Next())) {
TCanvas *c2 = new TCanvas("c2");
RooPlot *frame = obs->frame();
frame->SetName(Form("frame%d", nPlots));
frame->SetYTitle(var->GetName());
cout << Form("%s==%s::%s", channelCat->GetName(), channelCat->GetName(), tt->GetName()) << endl;
cout << tt->GetName() << " " << channelCat->getLabel() << endl;
data->plotOn(frame, MarkerSize(1),
Cut(Form("%s==%s::%s", channelCat->GetName(), channelCat->GetName(), tt->GetName())),
DataError(RooAbsData::None));
Double_t normCount =
data->sumEntries(Form("%s==%s::%s", channelCat->GetName(), channelCat->GetName(), tt->GetName()));
if (strcmp(var->GetName(), "Lumi") == 0) {
cout << "working on lumi" << endl;
var->setVal(w->var("nominalLumi")->getVal());
var->Print();
} else {
var->setVal(0);
}
// w->allVars().Print("v");
// mc->GetNuisanceParameters()->Print("v");
// pdftmp->plotOn(frame,LineWidth(2.));
// mc->GetPdf()->plotOn(frame,LineWidth(2.),Slice(*channelCat,tt->GetName()),ProjWData(*data));
// pdftmp->plotOn(frame,LineWidth(2.),Slice(*channelCat,tt->GetName()),ProjWData(*data));
normCount = pdftmp->expectedEvents(*obs);
pdftmp->plotOn(frame, LineWidth(2.), Normalization(normCount, RooAbsReal::NumEvent));
if (strcmp(var->GetName(), "Lumi") == 0) {
cout << "working on lumi" << endl;
var->setVal(w->var("nominalLumi")->getVal() + 0.05);
var->Print();
} else {
var->setVal(nSigmaToVary);
}
// pdftmp->plotOn(frame,LineColor(kRed),LineStyle(kDashed),LineWidth(2));
// mc->GetPdf()->plotOn(frame,LineColor(kRed),LineStyle(kDashed),LineWidth(2.),Slice(*channelCat,tt->GetName()),ProjWData(*data));
// pdftmp->plotOn(frame,LineColor(kRed),LineStyle(kDashed),LineWidth(2.),Slice(*channelCat,tt->GetName()),ProjWData(*data));
normCount = pdftmp->expectedEvents(*obs);
pdftmp->plotOn(frame, LineWidth(2.), LineColor(kRed), LineStyle(kDashed),
Normalization(normCount, RooAbsReal::NumEvent));
if (strcmp(var->GetName(), "Lumi") == 0) {
cout << "working on lumi" << endl;
var->setVal(w->var("nominalLumi")->getVal() - 0.05);
var->Print();
} else {
var->setVal(-nSigmaToVary);
}
// pdftmp->plotOn(frame,LineColor(kGreen),LineStyle(kDashed),LineWidth(2));
// mc->GetPdf()->plotOn(frame,LineColor(kGreen),LineStyle(kDashed),LineWidth(2),Slice(*channelCat,tt->GetName()),ProjWData(*data));
// pdftmp->plotOn(frame,LineColor(kGreen),LineStyle(kDashed),LineWidth(2),Slice(*channelCat,tt->GetName()),ProjWData(*data));
normCount = pdftmp->expectedEvents(*obs);
pdftmp->plotOn(frame, LineWidth(2.), LineColor(kGreen), LineStyle(kDashed),
Normalization(normCount, RooAbsReal::NumEvent));
// set them back to normal
if (strcmp(var->GetName(), "Lumi") == 0) {
cout << "working on lumi" << endl;
var->setVal(w->var("nominalLumi")->getVal());
var->Print();
} else {
var->setVal(0);
}
list->Add(frame);
// quit making plots
++nPlots;
frame->Draw();
c2->SaveAs(Form("%s_%s_%s.pdf", tt->GetName(), obs->GetName(), var->GetName()));
delete c2;
}
}
}
Now make plots
TCanvas *c1 = new TCanvas("c1", "ProfileInspectorDemo", 800, 200);
if (list->GetSize() > 4) {
double n = list->GetSize();
int nx = (int)sqrt(n);
int ny = TMath::CeilNint(n / nx);
nx = TMath::CeilNint(sqrt(n));
c1->Divide(ny, nx);
} else
c1->Divide(list->GetSize());
for (int i = 0; i < list->GetSize(); ++i) {
c1->cd(i + 1);
list->At(i)->Draw();
}
Draw all canvases
%jsroot on
gROOT->GetListOfCanvases()->Draw()