Subset cape verde turtles¶
Load complete Zarr store¶
In [1]:
import xarray as xr
import pandas as pd
In [2]:
data_path = "/data/cape_verde_turtles/output_data/PH_IMA1_stokes-True_consistent_run_subset.zarr/"
In [3]:
data_set = xr.open_zarr(data_path)
data_set
/tmp/ipykernel_29641/2208443440.py:1: RuntimeWarning: Failed to open Zarr store with consolidated metadata, falling back to try reading non-consolidated metadata. This is typically much slower for opening a dataset. To silence this warning, consider: 1. Consolidating metadata in this existing store with zarr.consolidate_metadata(). 2. Explicitly setting consolidated=False, to avoid trying to read consolidate metadata, or 3. Explicitly setting consolidated=True, to raise an error in this case instead of falling back to try reading non-consolidated metadata. data_set = xr.open_zarr(data_path)
Out[3]:
<xarray.Dataset>
Dimensions: (island: 1, year: 25, obs: 877, traj: 10000)
Coordinates:
* island (island) <U16 'Boa-Vista-larger'
* obs (obs) int64 0 1 2 3 4 5 6 7 8 ... 869 870 871 872 873 874 875 876
* traj (traj) int64 0 1 2 3 4 5 6 7 ... 9993 9994 9995 9996 9997 9998 9999
* year (year) int64 1993 1994 1995 1996 1997 ... 2013 2014 2015 2016 2017
Data variables:
lat (island, year, obs, traj) float32 dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
lon (island, year, obs, traj) float32 dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
temp (island, year, obs, traj) float32 dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
time (island, year, obs, traj) datetime64[ns] dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
z (island, year, obs, traj) float32 dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>xarray.Dataset
- island: 1
- year: 25
- obs: 877
- traj: 10000
- island(island)<U16'Boa-Vista-larger'
array(['Boa-Vista-larger'], dtype='<U16')
- obs(obs)int640 1 2 3 4 5 ... 872 873 874 875 876
array([ 0, 1, 2, ..., 874, 875, 876])
- traj(traj)int640 1 2 3 4 ... 9996 9997 9998 9999
array([ 0, 1, 2, ..., 9997, 9998, 9999])
- year(year)int641993 1994 1995 ... 2015 2016 2017
array([1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014, 2015, 2016, 2017])
- lat(island, year, obs, traj)float32dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
- axis :
- Y
- long_name :
- standard_name :
- latitude
- units :
- degrees_north
Array Chunk Bytes 836.37 MiB 33.45 MiB Shape (1, 25, 877, 10000) (1, 1, 877, 10000) Count 26 Tasks 25 Chunks Type float32 numpy.ndarray - lon(island, year, obs, traj)float32dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
- axis :
- X
- long_name :
- standard_name :
- longitude
- units :
- degrees_east
Array Chunk Bytes 836.37 MiB 33.45 MiB Shape (1, 25, 877, 10000) (1, 1, 877, 10000) Count 26 Tasks 25 Chunks Type float32 numpy.ndarray - temp(island, year, obs, traj)float32dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
- long_name :
- standard_name :
- temp
- units :
- unknown
Array Chunk Bytes 836.37 MiB 33.45 MiB Shape (1, 25, 877, 10000) (1, 1, 877, 10000) Count 26 Tasks 25 Chunks Type float32 numpy.ndarray - time(island, year, obs, traj)datetime64[ns]dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
- axis :
- T
- long_name :
- standard_name :
- time
Array Chunk Bytes 1.63 GiB 66.91 MiB Shape (1, 25, 877, 10000) (1, 1, 877, 10000) Count 26 Tasks 25 Chunks Type datetime64[ns] numpy.ndarray - z(island, year, obs, traj)float32dask.array<chunksize=(1, 1, 877, 10000), meta=np.ndarray>
- long_name :
- positive :
- down
- standard_name :
- depth
- units :
- m
Array Chunk Bytes 836.37 MiB 33.45 MiB Shape (1, 25, 877, 10000) (1, 1, 877, 10000) Count 26 Tasks 25 Chunks Type float32 numpy.ndarray
In [4]:
data_set[["lon", "lat"]].nbytes / 1e9
Out[4]:
1.75408728
Plot all trajs¶
In [5]:
data_set.isel(traj=slice(None, None, 100))[["lon", "lat"]].plot.scatter(
x="lon", y="lat", col="year", col_wrap=5, s=1, alpha=0.02,
);
Export CSVs¶
In [6]:
import tqdm
In [7]:
for year in tqdm.tqdm(data_set.coords["year"]):
(
data_set
.sel(year=year)
.isel(traj=slice(0, 10_000))
.drop(["island", ])
[["lat", "lon", "time", "temp"]]
.to_dataframe()
.reset_index()
.dropna()
).to_csv(
f"cape_verde_drift_trajectories_1-10000_{year.data[()]:04d}.csv.gz",
index=False,
)
100%|██████████| 25/25 [18:22<00:00, 44.09s/it]
In [8]:
for year in tqdm.tqdm(data_set.coords["year"]):
(
data_set
.sel(year=year)
.isel(traj=slice(0, 100))
.drop(["island", ])
[["lat", "lon", "time", "temp"]]
.to_dataframe()
.reset_index()
.dropna()
).to_csv(
f"cape_verde_drift_trajectories_1-100_{year.data[()]:04d}.csv",
index=False,
)
100%|██████████| 25/25 [00:34<00:00, 1.39s/it]
Get zip file of zarr store¶
In [11]:
%%bash
cd /data/cape_verde_turtles/output_data/
zip -rv PH_IMA1_stokes-True_consistent_run_subset.zarr.zip PH_IMA1_stokes-True_consistent_run_subset.zarr/
cd -
mv -v /data/cape_verde_turtles/output_data/PH_IMA1_stokes-True_consistent_run_subset.zarr.zip .
adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.11.0.0 . (in=10712621) (out=8131385) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.23.0.0 (in=9017299) (out=6685460) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.14.0.0 (in=8625720) (out=6511243) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.7.0.0 (in=8658766) (out=6381473) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.24.0.0 . (in=14798642) (out=10018805) (deflated 32%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.16.0.0 (in=8462620) (out=6332581) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.1.0.0 (in=6647920) (out=4786474) (deflated 28%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.17.0.0 . (in=11100493) (out=8290792) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.2.0.0 (in=8562524) (out=6325195) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.4.0.0 (in=7148877) (out=5152469) (deflated 28%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.6.0.0 (in=9815896) (out=7129796) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/.zarray (in=393) (out=184) (deflated 53%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.3.0.0 (in=7835932) (out=5854904) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.15.0.0 (in=9612784) (out=7079915) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/.zattrs (in=174) (out=110) (deflated 37%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.9.0.0 (in=6980020) (out=5035249) (deflated 28%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.8.0.0 (in=8620510) (out=6395277) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.21.0.0 (in=6652499) (out=4837277) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.18.0.0 (in=9167398) (out=6941465) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.22.0.0 (in=9344217) (out=7164941) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.13.0.0 (in=6844728) (out=5000754) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.5.0.0 (in=8212790) (out=6073642) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.20.0.0 (in=9787078) (out=7055081) (deflated 28%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.10.0.0 (in=8704352) (out=6385912) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.0.0.0 (in=9530170) (out=6947720) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.19.0.0 (in=10159865) (out=7570406) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/temp/0.12.0.0 (in=10382976) (out=7700535) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/island/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/island/0 (in=80) (out=45) (deflated 44%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/island/.zarray (in=313) (out=166) (deflated 47%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/island/.zattrs (in=53) (out=44) (deflated 17%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/obs/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/obs/0 (in=431) (out=336) (deflated 22%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/obs/.zarray (in=316) (out=166) (deflated 47%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/obs/.zattrs (in=50) (out=41) (deflated 18%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.11.0.0 . (in=11473414) (out=8807735) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.23.0.0 (in=9647589) (out=7255325) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.14.0.0 (in=9098772) (out=6970655) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.7.0.0 (in=9393841) (out=7007777) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.24.0.0 . (in=15370499) (out=11077409) (deflated 28%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.16.0.0 (in=9346281) (out=7167763) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.1.0.0 (in=7393440) (out=5418357) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.17.0.0 . (in=11581181) (out=8914410) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.2.0.0 (in=9415785) (out=7106332) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.4.0.0 (in=7841478) (out=5711871) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.6.0.0 . (in=10797582) (out=8049281) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/.zarray (in=393) (out=184) (deflated 53%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.3.0.0 (in=8503483) (out=6345349) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.15.0.0 (in=10031484) (out=7519456) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/.zattrs (in=201) (out=128) (deflated 36%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.9.0.0 (in=7541926) (out=5482227) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.8.0.0 (in=9427591) (out=6914044) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.21.0.0 (in=7401563) (out=5567961) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.18.0.0 (in=9666279) (out=7482891) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.22.0.0 (in=9991193) (out=7693580) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.13.0.0 (in=7674390) (out=5723993) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.5.0.0 (in=9008221) (out=6851274) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.20.0.0 (in=10348861) (out=7523883) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.10.0.0 (in=9527612) (out=6932691) (deflated 27%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.0.0.0 (in=10177968) (out=7583645) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.19.0.0 . (in=10845951) (out=8386465) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lat/0.12.0.0 . (in=11135630) (out=8424973) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.11.0.0 (in=5150667) (out=664657) (deflated 87%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.23.0.0 (in=4475692) (out=515097) (deflated 88%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.14.0.0 (in=4084781) (out=439520) (deflated 89%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.7.0.0 (in=4464270) (out=483319) (deflated 89%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.24.0.0 (in=9635310) (out=882344) (deflated 91%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.16.0.0 (in=4003502) (out=409231) (deflated 90%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.1.0.0 (in=3458398) (out=238874) (deflated 93%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.17.0.0 (in=5202341) (out=633140) (deflated 88%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.2.0.0 (in=4368649) (out=452444) (deflated 90%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.4.0.0 (in=3724061) (out=304943) (deflated 92%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.6.0.0 (in=5813189) (out=778314) (deflated 87%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/.zarray (in=393) (out=185) (deflated 53%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.3.0.0 (in=3838936) (out=364764) (deflated 90%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.15.0.0 (in=5118193) (out=669687) (deflated 87%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/.zattrs (in=255) (out=158) (deflated 38%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.9.0.0 (in=3778264) (out=292787) (deflated 92%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.8.0.0 (in=4268119) (out=466344) (deflated 89%) adding: 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PH_IMA1_stokes-True_consistent_run_subset.zarr/time/0.12.0.0 (in=5418391) (out=701517) (deflated 87%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/.zattrs (in=2) (out=2) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/year/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/year/0 (in=70) (out=63) (deflated 10%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/year/.zarray (in=314) (out=164) (deflated 48%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/year/.zattrs (in=51) (out=42) (deflated 18%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.11.0.0 (in=2276827) (out=172963) (deflated 92%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.23.0.0 (in=2014815) (out=132909) (deflated 93%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.14.0.0 (in=1858193) (out=110868) (deflated 94%) adding: 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PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.3.0.0 (in=1765397) (out=92943) (deflated 95%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.15.0.0 (in=2262915) (out=165043) (deflated 93%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/.zattrs (in=193) (out=120) (deflated 38%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.9.0.0 (in=1748737) (out=77791) (deflated 96%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.8.0.0 (in=1930009) (out=113226) (deflated 94%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.21.0.0 (in=1490113) (out=31036) (deflated 98%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.18.0.0 (in=1824683) (out=99682) (deflated 95%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.22.0.0 (in=1816385) (out=99097) (deflated 95%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.13.0.0 (in=1563555) (out=50456) (deflated 97%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.5.0.0 (in=1785641) (out=90317) (deflated 95%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.20.0.0 (in=2304467) (out=129485) (deflated 94%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.10.0.0 (in=2010293) (out=111144) (deflated 94%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.0.0.0 (in=2242809) (out=145186) (deflated 94%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.19.0.0 (in=2137451) (out=143840) (deflated 93%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/z/0.12.0.0 (in=2376497) (out=177841) (deflated 93%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.11.0.0 . (in=11343818) (out=8723498) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.23.0.0 (in=9723908) (out=7355381) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.14.0.0 (in=9348170) (out=7137072) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.7.0.0 (in=9204769) (out=6913489) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.24.0.0 . (in=15366727) (out=10933345) (deflated 29%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.16.0.0 (in=9174360) (out=7019112) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.1.0.0 (in=7191448) (out=5326497) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.17.0.0 . (in=11860156) (out=9035166) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.2.0.0 (in=9048206) (out=6816466) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.4.0.0 (in=7584318) (out=5619943) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.6.0.0 . (in=10528994) (out=7862401) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/.zarray (in=393) (out=184) (deflated 53%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.3.0.0 (in=8516384) (out=6459887) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.15.0.0 (in=10150030) (out=7625047) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/.zattrs (in=201) (out=126) (deflated 37%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.9.0.0 (in=7611459) (out=5624813) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.8.0.0 (in=8957413) (out=6724367) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.21.0.0 (in=7356808) (out=5555364) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.18.0.0 (in=9811093) (out=7597952) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.22.0.0 (in=10171329) (out=7926506) (deflated 22%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.13.0.0 (in=7577772) (out=5727797) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.5.0.0 (in=8672703) (out=6610543) (deflated 24%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.20.0.0 . (in=10521226) (out=7734490) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.10.0.0 (in=9241074) (out=6864829) (deflated 26%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.0.0.0 (in=10156437) (out=7613352) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.19.0.0 . (in=10777219) (out=8335826) (deflated 23%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/lon/0.12.0.0 . (in=11074629) (out=8335540) (deflated 25%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/.zgroup (in=24) (out=24) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/traj/ (in=0) (out=0) (stored 0%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/traj/0 (in=1338) (out=455) (deflated 66%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/traj/.zarray (in=320) (out=169) (deflated 47%) adding: PH_IMA1_stokes-True_consistent_run_subset.zarr/traj/.zattrs (in=51) (out=42) (deflated 18%) total bytes=875078554, compressed=544005183 -> 38% savings /home/jupyter-wrath/cape_verde_subsetting copied '/data/cape_verde_turtles/output_data/PH_IMA1_stokes-True_consistent_run_subset.zarr.zip' -> './PH_IMA1_stokes-True_consistent_run_subset.zarr.zip' removed '/data/cape_verde_turtles/output_data/PH_IMA1_stokes-True_consistent_run_subset.zarr.zip'
In [12]:
!mv -v PH_IMA1_stokes-True_consistent_run_subset.zarr.zip cape_verde_drift_trajectories_1993-2017.zarr.zip
renamed 'PH_IMA1_stokes-True_consistent_run_subset.zarr.zip' -> 'cape_verde_drift_trajectories_1993-2017.zarr.zip'