import numpy as np
import holoviews as hv
from holoviews import opts
hv.extension('bokeh')
A Path element represents one more lines, connecting arbitrary points in two-dimensional space. Path supports plotting an individual line or multiple subpaths, which should be supplied as a list. Each path should be defined in a columnar format such as NumPy arrays, DataFrames or dictionaries for each column. For a full description of the path geometry data model see the Geometry Data User Guide.
In this example we will create a Lissajous curve, which describe complex harmonic motion:
lin = np.linspace(0, np.pi*2, 200)
def lissajous(t, a, b, delta):
return (np.sin(a * t + delta), np.sin(b * t), t)
path = hv.Path([lissajous(lin, 3, 5, np.pi/2)])
path.opts(color='black', line_width=4)
If you looked carefully the lissajous function actually returns three columns, respectively for the x, y columns and a third column describing the point in time. By declaring a value dimension for that third column we can also color the Path by time. Since the value is cyclical we will also use a cyclic colormap ('hsv') to represent this variable:
path = hv.Path([lissajous(lin, 3, 5, np.pi/2)], vdims='time')
path.opts(cmap='hsv', color='time', line_width=4)
If we do not provide a color overlaid Path elements will cycle colors just like other elements do unlike Curve a single Path element can contain multiple lines that are disconnected from each other. A Path can therefore often useful to draw arbitrary annotations on top of an existing plot.
A Path Element accepts multiple formats for specifying the paths, the simplest of which is passing a list of Nx2 arrays of the x- and y-coordinates, alternative we can pass lists of coordinates. In this example we will create some coordinates representing rectangles and ellipses annotating an RGB image:
angle = np.linspace(0, 2*np.pi, 100)
baby = list(zip(0.15*np.sin(angle), 0.2*np.cos(angle)-0.2))
adultR = [(0.25, 0.45), (0.35,0.35), (0.25, 0.25), (0.15, 0.35), (0.25, 0.45)]
adultL = [(-0.3, 0.4), (-0.3, 0.3), (-0.2, 0.3), (-0.2, 0.4),(-0.3, 0.4)]
scene = hv.RGB.load_image('../assets/penguins.png')
overlay = (scene * hv.Path([adultL, adultR, baby]) * hv.Path([baby]))
overlay.opts(opts.Path(line_width=4))
A Path can also be used as a means to display a number of lines with the same sampling along the x-axis at once. If we initialize the Path with a tuple of x-coordinates and stacked y-coordinates, we can quickly view a number of lines at once. Here we will generate a number of random traces each slightly offset along the y-axis:
N, NLINES = 100, 10
paths = hv.Path((np.arange(N), np.random.rand(N, NLINES) + np.arange(NLINES)[np.newaxis, :]))
paths2 = hv.Path((np.arange(N), np.random.rand(N, NLINES) + np.arange(NLINES)[np.newaxis, :]))
overlay = paths * paths2
overlay.opts(width=600)
For full documentation and the available style and plot options, use hv.help(hv.Path).