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..
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RBD_average.ipynb
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RBD_bootstrap.ipynb
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biophysical_model.ipynb
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concentration_set.ipynb
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fit_2epitope.ipynb
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fit_RBD.ipynb
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library_size.ipynb
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mutation_rate.ipynb
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optimization.ipynb
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partition_function.ipynb
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real_LyCoV1404.ipynb
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real_cocktail.ipynb
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reference_site_numbering.ipynb
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simulate_RBD.ipynb
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specify_epitopes.ipynb
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visualize_RBD.ipynb
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2epitope_escape.csv
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2epitope_model_curve_specs.csv
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6M0J.pdb
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BA.1_site_numbering_map.csv
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Env_site_numbering_map.csv
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Env_trimer.pdb
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Lib-2_2022-06-22_thaw-1_LyCoV-1404_1_prob_escape.csv
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Omicron_BA.1_muteffects_observed.csv
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RBD_activity_wt_df.csv
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RBD_mean_class_1.pdb
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RBD_mean_class_1.png
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RBD_mean_class_2.pdb
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RBD_mean_class_2.png
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RBD_mean_class_3.pdb
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RBD_mean_class_3.png
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RBD_mut_escape_df.csv
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RBD_mut_escape_df.py
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RBD_mutation_escape_fractions.csv
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RBD_seq.fasta
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RBD_variants_escape_exact.csv
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RBD_variants_escape_noisy.csv
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README.md
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libA_220810_1_1C04-5G04_1_prob_escape.csv
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