1. bioinformatics_algorithms
Name
arjan-hada's repositories
.ipynb_checkpoints
images
input
output
3K_ContigGenerationProblem.ipynb
3M_MaximalNonBranchingPaths.ipynb
4E_CyclopeptideSequencing.ipynb
4F_CyclopeptideScoringProblem.ipynb
4G_LeaderboardCyclopeptideSequencing.ipynb
4H_SpectralConvolutionProblem.ipynb
4I_ConvolutionCyclopeptideSequencing.ipynb
4L_TrimmingThePeptideLeaderboard.ipynb
5A_DPChange.ipynb
5B_ManhattanTourist.ipynb
5C_OutputLCS.ipynb
5D_LongestPathInDAG.ipynb
5E_GlobalAlignment.ipynb
5F_LocalAlignment.ipynb
5G_EditDistanceProblem.ipynb
5H_FittingAlignment.ipynb
5I_OverlapAlignment.ipynb
5J_AffineGapPenalty.ipynb
5K_MiddleEdgeLinearSpace.ipynb
5M_MSA_cheat.ipynb
5M_MultipleSequenceAlignment.ipynb
5N_TopologicalOrdering.ipynb
6A_GreedySorting.ipynb
6B_NumOfBreakpoints.ipynb
6C_twoBreakDistance.ipynb
6E_Shared_k-mers.ipynb
6F_chromosomeToCycle.ipynb
6G_cycleToChromosome.ipynb
6H_coloredEdges.ipynb
6I_GraphToGenome.ipynb
BA1.ipynb
BA2.ipynb
BA3.ipynb
BA4.ipynb
affine.ipynb
CyclopeptideSequencing.py
E-coli.txt
GibbsSampler.py
README.md
Refseq.gtf.txt
StringSpelledByGappedPatterns.txt
Vibrio_cholerae.txt
dataset_161_5.txt
dataset_163_4.txt
dataset_198_3.txt
dataset_198_9.txt
dataset_200_7.txt
dataset_203_2.txt
dataset_203_5.txt
dataset_203_6.txt
dataset_204_14.txt
dataset_205_5.txt
dataset_6206_7.txt
dist copy.txt
dist.txt
eulercycle.txt
findIsolatedCycles.py
gibbsSampler.txt
greedyMotif.txt
greedyMotif2.txt
maximalnonbranching.py
median_string.txt
prog.py
randomizedMotifsearch.py
rosalind_ba2b.txt
rosalind_ba2d.txt
rosalind_ba2h.txt
rosalind_ba3f.txt